Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm25093-201ENSMUST00000103993 132 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm14531-201ENSMUST00000120845 285 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm7613-201ENSMUST00000139070 487 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm8550-201ENSMUST00000161621 653 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm37966-201ENSMUST00000193122 326 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm43390-201ENSMUST00000196614 421 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.67□□□□□ -1.34
Trim43aQ3TL54 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim43aQ3TL54 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm12573-201ENSMUST00000118158 286 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm13156-201ENSMUST00000118348 321 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm16511-201ENSMUST00000120019 564 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm14515-201ENSMUST00000121327 216 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm14847-201ENSMUST00000121978 519 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm12778-201ENSMUST00000122341 333 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm22214-201ENSMUST00000157563 172 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm26037-201ENSMUST00000158150 311 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm4860-201ENSMUST00000200368 454 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm45156-201ENSMUST00000207255 439 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm17994-201ENSMUST00000209260 533 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm3785-201ENSMUST00000221000 202 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim43aQ3TL54 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.66□□□□□ -1.34
Trim43aQ3TL54 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm22256-201ENSMUST00000102291 107 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm24888-201ENSMUST00000104387 130 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm2178-201ENSMUST00000104927 357 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm12939-201ENSMUST00000117303 165 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm14863-201ENSMUST00000119648 307 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm4202-201ENSMUST00000169025 733 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm20454-201ENSMUST00000172713 221 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm5324-201ENSMUST00000208115 476 ntBASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm6575-201ENSMUST00000222946 697 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms