Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm18781-201ENSMUST00000211252 924 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PrkdcP97313 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PrkdcP97313 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm20673-201ENSMUST00000177167 430 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm18127-201ENSMUST00000208479 725 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 AC154767.2-201ENSMUST00000224584 414 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 AC124421.1-201ENSMUST00000219114 4154 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm13566-201ENSMUST00000117428 1142 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm13567-201ENSMUST00000118026 247 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.15□□□□□ -1.74
PrkdcP97313 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.15□□□□□ -1.74
PrkdcP97313 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm14762-201ENSMUST00000105109 1771 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PrkdcP97313 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm10744-201ENSMUST00000220184 2706 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PrkdcP97313 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PrkdcP97313 Gm14172-201ENSMUST00000118255 644 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm13604-201ENSMUST00000119332 482 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm13222-201ENSMUST00000119638 138 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm6611-201ENSMUST00000163830 1272 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Mir449a-201ENSMUST00000083641 91 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Gm22826-201ENSMUST00000083774 165 ntBASIC4.15□□□□□ -1.74
PrkdcP97313 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PrkdcP97313 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
PrkdcP97313 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PrkdcP97313 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm42541-201ENSMUST00000199871 2249 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm42873-201ENSMUST00000196110 1726 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm24469-201ENSMUST00000104487 131 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Gm14796-201ENSMUST00000121216 959 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Gm29332-201ENSMUST00000190829 227 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PrkdcP97313 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm37570-201ENSMUST00000195411 3106 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PrkdcP97313 AC098728.1-202ENSMUST00000226656 2198 ntBASIC4.15□□□□□ -1.75
PrkdcP97313 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC4.15□□□□□ -1.75
PrkdcP97313 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
PrkdcP97313 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PrkdcP97313 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC4.15□□□□□ -1.75
PrkdcP97313 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms