Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 Gm7413-201ENSMUST00000219498 462 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.63□□□□□ -1.51
H3f3aP84244 Gm7557-201ENSMUST00000221935 865 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.63□□□□□ -1.51
H3f3aP84244 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Gm10108-201ENSMUST00000078246 319 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
H3f3aP84244 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.63□□□□□ -1.51
H3f3aP84244 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
H3f3aP84244 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
H3f3aP84244 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3f3aP84244 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm15765-201ENSMUST00000118407 910 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm7571-201ENSMUST00000120252 927 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm12369-201ENSMUST00000121343 942 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm5283-201ENSMUST00000177874 334 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm26557-201ENSMUST00000180756 493 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm37511-201ENSMUST00000192901 294 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm8869-201ENSMUST00000195222 947 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm43048-201ENSMUST00000196101 388 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm43772-201ENSMUST00000202052 379 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm18103-201ENSMUST00000216621 779 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm26442-201ENSMUST00000082588 153 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
H3f3aP84244 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
H3f3aP84244 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.62□□□□□ -1.51
H3f3aP84244 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm26289-201ENSMUST00000104169 131 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm14173-201ENSMUST00000117690 278 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
H3f3aP84244 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm23894-201ENSMUST00000158107 313 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.61□□□□□ -1.51
H3f3aP84244 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm43354-201ENSMUST00000196862 346 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm43850-201ENSMUST00000202021 578 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm44225-201ENSMUST00000203582 186 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm9293-201ENSMUST00000223096 306 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
H3f3aP84244 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
H3f3aP84244 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
H3f3aP84244 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
H3f3aP84244 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.61□□□□□ -1.51
H3f3aP84244 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms