Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sec61a1P61620 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Sec61a1P61620 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm11501-201ENSMUST00000118039 581 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm5387-201ENSMUST00000119776 857 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm11553-201ENSMUST00000120682 240 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm12175-201ENSMUST00000122081 345 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm25717-201ENSMUST00000158631 353 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm20778-201ENSMUST00000178524 627 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm10297-201ENSMUST00000207136 651 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm44845-201ENSMUST00000208773 335 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm7588-201ENSMUST00000216866 571 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm8290-201ENSMUST00000218202 477 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sec61a1P61620 Gm5341-201ENSMUST00000058881 489 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 AW822073-201ENSMUST00000075305 555 ntBASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Sec61a1P61620 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.65□□□□□ -1.51
Sec61a1P61620 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.65□□□□□ -1.51
Sec61a1P61620 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.65□□□□□ -1.51
Sec61a1P61620 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.65□□□□□ -1.51
Sec61a1P61620 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.65□□□□□ -1.51
Sec61a1P61620 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sec61a1P61620 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.65□□□□□ -1.51
Sec61a1P61620 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sec61a1P61620 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Sec61a1P61620 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sec61a1P61620 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.64□□□□□ -1.51
Sec61a1P61620 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Sec61a1P61620 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.64□□□□□ -1.51
Sec61a1P61620 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sec61a1P61620 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms