Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm4831-201ENSMUST00000174626 594 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm25244-201ENSMUST00000178089 132 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm27970-201ENSMUST00000184854 407 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm412-201ENSMUST00000193360 948 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm37177-201ENSMUST00000193768 417 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.93□□□□□ -1.3
Shmt1P50431 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Shmt1P50431 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm21731-201ENSMUST00000079524 489 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Shmt1P50431 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm22374-201ENSMUST00000104583 132 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm3931-201ENSMUST00000119038 455 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm16129-201ENSMUST00000152628 486 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm3715-201ENSMUST00000172308 617 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm8506-201ENSMUST00000186661 829 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm19124-201ENSMUST00000191041 832 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm43478-201ENSMUST00000200381 292 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm22684-201ENSMUST00000082849 132 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Gm22351-201ENSMUST00000083925 107 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Thap6-201ENSMUST00000191860 3151 ntBASIC6.92□□□□□ -1.3
Shmt1P50431 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.92□□□□□ -1.3
Shmt1P50431 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Shmt1P50431 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.92□□□□□ -1.3
Shmt1P50431 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Shmt1P50431 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Shmt1P50431 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.91□□□□□ -1.3
Shmt1P50431 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Shmt1P50431 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.91□□□□□ -1.3
Shmt1P50431 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Shmt1P50431 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Shmt1P50431 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Shmt1P50431 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Shmt1P50431 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Shmt1P50431 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Shmt1P50431 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms