Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm37254-201ENSMUST00000193542 3901 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm14885-201ENSMUST00000117969 496 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm14584-201ENSMUST00000118956 637 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm12630-201ENSMUST00000121575 784 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Mir1907-201ENSMUST00000122509 90 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.23□□□□□ -1.09
Rfx1P48377 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm17223-201ENSMUST00000171413 481 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm7341-201ENSMUST00000192183 926 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm45689-201ENSMUST00000210522 133 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm45756-201ENSMUST00000212491 407 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 AC151843.1-201ENSMUST00000215960 691 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm7392-201ENSMUST00000217815 345 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Gm30738-201ENSMUST00000221346 502 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 AC122937.1-201ENSMUST00000226405 793 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 CT030684.2-201ENSMUST00000228946 826 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Rfx1P48377 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Rfx1P48377 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.23□□□□□ -1.09
Rfx1P48377 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rfx1P48377 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rfx1P48377 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rfx1P48377 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm19176-201ENSMUST00000222149 1831 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Rfx1P48377 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm4596-201ENSMUST00000117197 442 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm16200-201ENSMUST00000120385 331 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 BC002163-201ENSMUST00000121906 319 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm11838-201ENSMUST00000121999 231 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm24532-201ENSMUST00000157951 286 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm24228-201ENSMUST00000158829 129 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm44370-201ENSMUST00000175436 112 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm5181-201ENSMUST00000183140 971 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm18382-201ENSMUST00000194394 582 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm9245-201ENSMUST00000200528 983 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm44727-201ENSMUST00000204225 451 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms