Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm19088-201ENSMUST00000198800 566 ntBASIC5.6□□□□□ -1.51
P20040 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.6□□□□□ -1.51
P20040 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.6□□□□□ -1.51
P20040 Gm18838-201ENSMUST00000204855 886 ntBASIC5.6□□□□□ -1.51
P20040 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.6□□□□□ -1.51
P20040 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
P20040 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.6□□□□□ -1.51
P20040 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
P20040 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
P20040 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
P20040 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
P20040 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.6□□□□□ -1.51
P20040 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.6□□□□□ -1.51
P20040 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.6□□□□□ -1.51
P20040 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
P20040 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.6□□□□□ -1.51
P20040 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.59□□□□□ -1.51
P20040 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.59□□□□□ -1.51
P20040 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.59□□□□□ -1.51
P20040 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
P20040 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.59□□□□□ -1.51
P20040 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
P20040 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.59□□□□□ -1.51
P20040 Gm14733-201ENSMUST00000117680 133 ntBASIC5.59□□□□□ -1.51
P20040 Gm11445-201ENSMUST00000119101 532 ntBASIC5.59□□□□□ -1.51
P20040 Gm13604-201ENSMUST00000119332 482 ntBASIC5.59□□□□□ -1.51
P20040 Gm13740-201ENSMUST00000120590 310 ntBASIC5.59□□□□□ -1.51
P20040 Gm15786-201ENSMUST00000121079 450 ntBASIC5.59□□□□□ -1.51
P20040 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Gm23674-201ENSMUST00000157473 131 ntBASIC5.59□□□□□ -1.51
P20040 Gm25550-201ENSMUST00000158079 128 ntBASIC5.59□□□□□ -1.51
P20040 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
P20040 Gm20432-201ENSMUST00000173716 250 ntBASIC5.59□□□□□ -1.51
P20040 Gm25675-201ENSMUST00000174979 118 ntBASIC5.59□□□□□ -1.51
P20040 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.59□□□□□ -1.51
P20040 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.59□□□□□ -1.51
P20040 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
P20040 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P20040 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P20040 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm43048-201ENSMUST00000196101 388 ntBASIC5.59□□□□□ -1.51
P20040 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.59□□□□□ -1.51
P20040 Gm43576-201ENSMUST00000197937 871 ntBASIC5.59□□□□□ -1.51
P20040 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.59□□□□□ -1.51
P20040 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.59□□□□□ -1.51
P20040 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.59□□□□□ -1.51
P20040 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.59□□□□□ -1.51
P20040 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.59□□□□□ -1.51
P20040 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.59□□□□□ -1.51
P20040 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
P20040 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
P20040 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
P20040 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.59□□□□□ -1.51
P20040 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
P20040 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P20040 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.59□□□□□ -1.51
P20040 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P20040 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.59□□□□□ -1.52
P20040 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
P20040 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.59□□□□□ -1.52
P20040 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
P20040 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
P20040 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.59□□□□□ -1.52
P20040 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
P20040 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
P20040 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.59□□□□□ -1.52
P20040 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.59□□□□□ -1.52
P20040 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms