Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Lire1P11260 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.32□□□□□ -1.4
Lire1P11260 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.32□□□□□ -1.4
Lire1P11260 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.32□□□□□ -1.4
Lire1P11260 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.32□□□□□ -1.4
Lire1P11260 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Gm37996-201ENSMUST00000191859 367 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Gm37349-201ENSMUST00000194205 624 ntBASIC6.32□□□□□ -1.4
Lire1P11260 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Gm24826-202ENSMUST00000197298 216 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.32□□□□□ -1.4
Lire1P11260 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.32□□□□□ -1.4
Lire1P11260 Gm44896-201ENSMUST00000206190 772 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.32□□□□□ -1.4
Lire1P11260 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.32□□□□□ -1.4
Lire1P11260 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.32□□□□□ -1.4
Lire1P11260 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.32□□□□□ -1.4
Lire1P11260 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Lire1P11260 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Lire1P11260 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Lire1P11260 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Lire1P11260 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lire1P11260 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lire1P11260 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Lire1P11260 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm13469-201ENSMUST00000118231 350 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm13940-201ENSMUST00000121023 301 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm14353-201ENSMUST00000122200 869 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm24382-201ENSMUST00000122698 107 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.31□□□□□ -1.4
Lire1P11260 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm16026-205ENSMUST00000162923 641 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm3760-201ENSMUST00000167475 804 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm29605-201ENSMUST00000190800 292 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm18907-201ENSMUST00000209719 932 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.31□□□□□ -1.4
Lire1P11260 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.31□□□□□ -1.4
Lire1P11260 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.31□□□□□ -1.4
Lire1P11260 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.31□□□□□ -1.4
Lire1P11260 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm23734-201ENSMUST00000083753 109 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.31□□□□□ -1.4
Lire1P11260 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms