Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm7129-201ENSMUST00000117402 997 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm11926-201ENSMUST00000118520 430 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Mir3072-201ENSMUST00000175610 83 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hmgb3O54879 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm5334-201ENSMUST00000187472 720 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm5734-201ENSMUST00000189787 913 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm38135-201ENSMUST00000195068 502 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm37477-201ENSMUST00000195215 884 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hmgb3O54879 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm24621-201ENSMUST00000082679 140 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.04□□□□□ -1.6
Hmgb3O54879 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb3O54879 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm29761-201ENSMUST00000215964 1939 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm14630-201ENSMUST00000118057 246 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm12813-201ENSMUST00000119615 902 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm15311-201ENSMUST00000119682 282 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm16511-201ENSMUST00000120019 564 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm15305-201ENSMUST00000120354 288 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm12104-201ENSMUST00000120359 979 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm22035-201ENSMUST00000157284 228 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm27019-201ENSMUST00000183056 404 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm29141-201ENSMUST00000190357 882 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm7412-201ENSMUST00000191692 605 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm37376-201ENSMUST00000192176 453 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.03□□□□□ -1.6
Hmgb3O54879 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm9497-201ENSMUST00000199908 538 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm7557-201ENSMUST00000221935 865 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms