Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm2986-201ENSMUST00000121603 382 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm25116-201ENSMUST00000157191 122 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm16297-201ENSMUST00000161466 459 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Mir5107-201ENSMUST00000175586 88 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm27005-201ENSMUST00000182783 921 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm43561-201ENSMUST00000199866 448 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm43203-201ENSMUST00000200130 558 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm43850-201ENSMUST00000202021 578 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm18103-201ENSMUST00000216621 779 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm5321-201ENSMUST00000072050 447 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.24□□□□□ -1.41
H2afb2S4R1M3 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm12654-201ENSMUST00000120387 587 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm7494-201ENSMUST00000121248 441 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm23954-201ENSMUST00000157213 353 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm6264-201ENSMUST00000160802 624 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm44837-201ENSMUST00000206863 717 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm45473-201ENSMUST00000211452 616 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Mir7b-201ENSMUST00000083557 111 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb2S4R1M3 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms