Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm28023-201ENSMUST00000184556 60 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm27825-201ENSMUST00000184586 60 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm18952-201ENSMUST00000194471 846 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm37901-201ENSMUST00000195107 514 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm43576-201ENSMUST00000197937 871 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm43867-201ENSMUST00000203860 525 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm17849-201ENSMUST00000219788 853 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm7731-201ENSMUST00000091759 470 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm13024-201ENSMUST00000121756 718 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm25962-201ENSMUST00000157173 168 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm23674-201ENSMUST00000157473 131 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm9027-201ENSMUST00000165914 661 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm27998-201ENSMUST00000184902 361 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm18849-201ENSMUST00000189861 560 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm7463-201ENSMUST00000201541 547 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm45343-201ENSMUST00000210452 828 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm45485-201ENSMUST00000211229 357 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Smc1aQ9CU62 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Mir708-201ENSMUST00000102189 109 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm23311-201ENSMUST00000104152 134 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm22523-201ENSMUST00000158696 100 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm5456-201ENSMUST00000170706 844 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm17045-201ENSMUST00000178600 844 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms