Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm24812-201ENSMUST00000175315 284 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm5244-202ENSMUST00000189517 743 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm7626-201ENSMUST00000195801 353 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rpa3Q9CQ71 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm12439-201ENSMUST00000117162 365 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm13469-201ENSMUST00000118231 350 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm12442-201ENSMUST00000118372 338 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm15181-201ENSMUST00000120142 177 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm26486-201ENSMUST00000158021 110 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm24155-201ENSMUST00000175259 110 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm18700-201ENSMUST00000185791 553 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm9127-201ENSMUST00000188041 985 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm38237-201ENSMUST00000193366 376 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm44075-201ENSMUST00000204208 216 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm44984-201ENSMUST00000207802 394 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm45448-201ENSMUST00000211739 209 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm7413-201ENSMUST00000219498 462 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.62□□□□□ -1.35
Rpa3Q9CQ71 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Gm22231-201ENSMUST00000101027 73 ntBASIC6.61□□□□□ -1.35
Rpa3Q9CQ71 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms