Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm26079-201ENSMUST00000104066 133 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm14116-201ENSMUST00000117733 805 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm7113-201ENSMUST00000120477 958 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm20432-201ENSMUST00000173716 250 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm23968-201ENSMUST00000175047 125 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm28149-201ENSMUST00000187102 378 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm28768-201ENSMUST00000189034 378 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm28620-201ENSMUST00000190463 439 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm5928-201ENSMUST00000221839 466 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.3□□□□□ -1.4
Msh4Q99MT2 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.3□□□□□ -1.4
Msh4Q99MT2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm12653-201ENSMUST00000117778 561 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm11445-201ENSMUST00000119101 532 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms