Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Rnu11-201ENSMUST00000104135 134 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm24989-201ENSMUST00000104461 88 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm12842-201ENSMUST00000117298 476 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm13357-201ENSMUST00000120528 537 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm25550-201ENSMUST00000158079 128 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Mir7685-201ENSMUST00000183555 62 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm21139-201ENSMUST00000186594 877 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm8860-201ENSMUST00000193160 445 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37477-201ENSMUST00000195215 884 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm38328-201ENSMUST00000195582 317 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm19092-201ENSMUST00000209036 969 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm2398-201ENSMUST00000218347 883 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm7557-201ENSMUST00000221935 865 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Mir412-201ENSMUST00000083636 80 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.55□□□□□ -1.36
Cdk5rap3Q99LM2 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm11462-201ENSMUST00000117749 562 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm25435-201ENSMUST00000158277 267 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm20561-201ENSMUST00000188131 292 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37770-201ENSMUST00000192855 772 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Gm9321-201ENSMUST00000221179 778 ntBASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cdk5rap3Q99LM2 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms