Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.66□□□□□ -1.34
Usp11Q99K46 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp11Q99K46 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp11Q99K46 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.66□□□□□ -1.34
Usp11Q99K46 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Usp11Q99K46 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Usp11Q99K46 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Usp11Q99K46 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm24173-201ENSMUST00000104130 128 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm26422-201ENSMUST00000104276 132 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm23768-201ENSMUST00000104440 131 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm6654-201ENSMUST00000118950 348 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm13366-201ENSMUST00000122198 970 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm26381-201ENSMUST00000174895 92 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm22569-201ENSMUST00000175545 124 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm27601-201ENSMUST00000184794 127 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm37380-201ENSMUST00000193752 397 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm44265-201ENSMUST00000203631 465 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm7351-201ENSMUST00000210745 580 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.65□□□□□ -1.34
Usp11Q99K46 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp11Q99K46 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Usp11Q99K46 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.65□□□□□ -1.34
Usp11Q99K46 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp11Q99K46 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.65□□□□□ -1.35
Usp11Q99K46 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Usp11Q99K46 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Usp11Q99K46 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.65□□□□□ -1.35
Usp11Q99K46 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Usp11Q99K46 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp11Q99K46 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm26340-201ENSMUST00000102365 99 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm5793-201ENSMUST00000119393 630 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm12101-201ENSMUST00000121590 390 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm13487-201ENSMUST00000122240 864 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm25244-201ENSMUST00000178089 132 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm27468-201ENSMUST00000183577 106 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm7769-201ENSMUST00000212900 933 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.64□□□□□ -1.35
Usp11Q99K46 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Usp11Q99K46 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp11Q99K46 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms