Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm12565-201ENSMUST00000119004 649 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm24812-201ENSMUST00000175315 284 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm9293-201ENSMUST00000223096 306 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Brf1Q8CFK2 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm12369-201ENSMUST00000121343 942 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Mir5107-201ENSMUST00000175586 88 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm8869-201ENSMUST00000195222 947 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm37614-201ENSMUST00000195645 210 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm5050-201ENSMUST00000197164 775 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Brf1Q8CFK2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms