Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm9597-201ENSMUST00000171913 602 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm18199-201ENSMUST00000173820 835 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm21756-201ENSMUST00000178380 930 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm21405-201ENSMUST00000179024 930 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm22254-201ENSMUST00000179186 110 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm7745-201ENSMUST00000182235 973 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm21191-201ENSMUST00000186484 930 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm19124-201ENSMUST00000191041 832 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm29503-201ENSMUST00000191044 930 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm8860-201ENSMUST00000193160 445 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm37614-201ENSMUST00000195645 210 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm42619-201ENSMUST00000197564 1136 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm19033-201ENSMUST00000208516 964 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm44845-201ENSMUST00000208773 335 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm18043-201ENSMUST00000216741 739 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm19540-201ENSMUST00000221843 810 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm23456-201ENSMUST00000083335 137 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm14796-201ENSMUST00000121216 959 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm14840-201ENSMUST00000122135 594 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm22599-201ENSMUST00000157597 132 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm25363-201ENSMUST00000158850 245 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm19560-201ENSMUST00000177510 514 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm27970-201ENSMUST00000184854 407 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm37203-201ENSMUST00000191618 385 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm18781-201ENSMUST00000211252 924 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm2996-201ENSMUST00000211398 537 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm45850-201ENSMUST00000212536 338 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.43□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 422.1 ms