Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm22917-201ENSMUST00000180116 110 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm28112-201ENSMUST00000190898 1875 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 AC133948.2-201ENSMUST00000217850 378 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm19217-201ENSMUST00000218238 328 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm19074-201ENSMUST00000218915 1429 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 CT030166.4-201ENSMUST00000220640 404 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 CT030194.2-201ENSMUST00000225752 379 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm7984-201ENSMUST00000060640 538 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm42866-201ENSMUST00000195919 3304 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm13928-201ENSMUST00000120326 1732 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 n-R5s178-201ENSMUST00000104249 114 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm14981-201ENSMUST00000117325 943 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm13579-201ENSMUST00000118519 517 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm11445-201ENSMUST00000119101 532 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm9078-201ENSMUST00000119126 617 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm25808-201ENSMUST00000122784 284 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm15914-201ENSMUST00000161922 309 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm27854-201ENSMUST00000175578 244 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Mir3090-201ENSMUST00000175597 87 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm21638-201ENSMUST00000179473 836 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm17786-201ENSMUST00000182000 427 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm27653-201ENSMUST00000185037 136 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm43505-201ENSMUST00000200579 139 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm7495-201ENSMUST00000215099 426 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 AC115750.1-201ENSMUST00000220441 567 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 n-R5s29-201ENSMUST00000082836 119 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm37902-201ENSMUST00000192839 1683 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm18726-201ENSMUST00000218175 2010 ntBASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim41Q5NCC3 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm26945-201ENSMUST00000183191 2011 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm12814-201ENSMUST00000117091 846 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm14580-201ENSMUST00000119122 718 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm12433-201ENSMUST00000119659 255 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm12175-201ENSMUST00000122081 345 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm15508-201ENSMUST00000160330 325 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm3076-201ENSMUST00000161613 451 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm18205-201ENSMUST00000209215 841 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 AC153971.2-201ENSMUST00000214553 777 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm19219-201ENSMUST00000215863 724 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 AC151901.1-201ENSMUST00000218274 180 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 CT030182.4-201ENSMUST00000223647 645 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 AC137871.3-201ENSMUST00000226628 225 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm25739-201ENSMUST00000082886 107 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm6990-201ENSMUST00000086830 348 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm12661-201ENSMUST00000118780 3335 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm29113-201ENSMUST00000185991 3432 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Gm37772-201ENSMUST00000191635 1394 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC12.9□□□□□ -0.34
Trim41Q5NCC3 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim41Q5NCC3 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim41Q5NCC3 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim41Q5NCC3 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms