Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm23979-201ENSMUST00000104071 128 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25564-201ENSMUST00000104604 132 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm22103-201ENSMUST00000116733 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm26475-201ENSMUST00000116769 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm23620-201ENSMUST00000116812 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25042-201ENSMUST00000116856 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25540-201ENSMUST00000116880 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm14382-201ENSMUST00000117374 437 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm14733-201ENSMUST00000117680 133 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm12540-201ENSMUST00000121938 319 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm23550-201ENSMUST00000179003 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25123-201ENSMUST00000179154 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25353-201ENSMUST00000179366 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm22992-201ENSMUST00000179496 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm25892-201ENSMUST00000179867 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm24092-201ENSMUST00000180257 121 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm8183-201ENSMUST00000183134 980 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Mir7082-201ENSMUST00000183526 92 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm37189-201ENSMUST00000192131 298 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm2229-201ENSMUST00000193328 710 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm46364-201ENSMUST00000218548 319 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trafd1Q3UDK1 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Trafd1Q3UDK1 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Trafd1Q3UDK1 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm25415-201ENSMUST00000104220 132 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm12439-201ENSMUST00000117162 365 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm15016-201ENSMUST00000117300 720 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm8855-201ENSMUST00000118888 878 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm16016-201ENSMUST00000120831 550 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm12101-201ENSMUST00000121590 390 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm5244-202ENSMUST00000189517 743 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm32158-201ENSMUST00000200135 404 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm44162-201ENSMUST00000203543 544 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm45626-201ENSMUST00000210093 361 ntBASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trafd1Q3UDK1 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms