Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Hmgb1P63158 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm18954-201ENSMUST00000222200 1792 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm26182-201ENSMUST00000157688 116 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm25717-201ENSMUST00000158631 353 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm9457-201ENSMUST00000180176 372 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm37383-201ENSMUST00000191750 745 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm6197-201ENSMUST00000192273 454 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm37629-201ENSMUST00000193635 1050 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Trdv3-201ENSMUST00000198551 309 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Gm44548-201ENSMUST00000208929 192 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 AC173345.3-201ENSMUST00000221245 1093 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 AC107369.1-201ENSMUST00000227373 860 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Hmgb1P63158 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.47□□□□□ -1.21
Hmgb1P63158 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Hmgb1P63158 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmgb1P63158 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC7.46□□□□□ -1.21
Hmgb1P63158 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.46□□□□□ -1.21
Hmgb1P63158 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Hmgb1P63158 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.46□□□□□ -1.21
Hmgb1P63158 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Hmgb1P63158 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.46□□□□□ -1.21
Hmgb1P63158 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Hmgb1P63158 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Hmgb1P63158 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Hmgb1P63158 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Hmgb1P63158 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.46□□□□□ -1.21
Hmgb1P63158 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm12131-201ENSMUST00000117479 359 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm22035-201ENSMUST00000157284 228 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm25180-201ENSMUST00000157746 115 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Mir1929-201ENSMUST00000158635 93 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm15508-201ENSMUST00000160330 325 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm26179-201ENSMUST00000177723 132 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm8319-201ENSMUST00000205708 641 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm18781-201ENSMUST00000211252 924 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm6885-201ENSMUST00000217261 372 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 AC174776.1-201ENSMUST00000221509 405 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 AC174776.2-201ENSMUST00000222561 405 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm24451-201ENSMUST00000083353 133 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Hmgb1P63158 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.46□□□□□ -1.22
Hmgb1P63158 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC7.46□□□□□ -1.22
Hmgb1P63158 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Hmgb1P63158 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms