Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm46203-201ENSMUST00000218130 478 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC122533.1-201ENSMUST00000225177 767 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm24621-201ENSMUST00000082679 140 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdh11P55288 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdh11P55288 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm23979-201ENSMUST00000104071 128 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm26146-201ENSMUST00000104478 185 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm12931-201ENSMUST00000117046 324 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm14116-201ENSMUST00000117733 805 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm14870-201ENSMUST00000118414 156 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm11445-201ENSMUST00000119101 532 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm12135-201ENSMUST00000119170 466 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm13207-201ENSMUST00000119862 773 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm12369-201ENSMUST00000121343 942 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm11609-201ENSMUST00000121926 793 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdh11P55288 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdh11P55288 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.81□□□□□ -1.48
Cdh11P55288 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm29663-201ENSMUST00000186962 853 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm18849-201ENSMUST00000189861 560 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm37676-201ENSMUST00000195496 507 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm43689-201ENSMUST00000195951 427 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm8454-201ENSMUST00000196980 811 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm42581-201ENSMUST00000201774 966 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm43772-201ENSMUST00000202052 379 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdh11P55288 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdh11P55288 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdh11P55288 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
Cdh11P55288 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.81□□□□□ -1.48
Cdh11P55288 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdh11P55288 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdh11P55288 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 282.7 ms