Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm5110-201ENSMUST00000203122 1063 ntBASIC9.59□□□□□ -0.87
Cux1P53564 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC9.59□□□□□ -0.87
Cux1P53564 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC9.59□□□□□ -0.87
Cux1P53564 AC122332.1-201ENSMUST00000214384 285 ntBASIC9.59□□□□□ -0.87
Cux1P53564 AC168056.2-201ENSMUST00000223591 269 ntBASIC9.59□□□□□ -0.87
Cux1P53564 AC166369.2-201ENSMUST00000228403 308 ntBASIC9.59□□□□□ -0.87
Cux1P53564 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.59□□□□□ -0.87
Cux1P53564 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Gm10062-201ENSMUST00000072180 1470 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Gm42894-201ENSMUST00000200788 3390 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Cux1P53564 Gm25439-201ENSMUST00000158280 131 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Ighv5-19-201ENSMUST00000193466 297 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC9.58□□□□□ -0.88
Cux1P53564 Gm9480-201ENSMUST00000198038 616 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Gm44837-201ENSMUST00000206863 717 ntBASIC9.58□□□□□ -0.88
Cux1P53564 LOC665443-201ENSMUST00000212284 796 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Gm23330-201ENSMUST00000082660 164 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Gm23238-201ENSMUST00000083007 164 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.58□□□□□ -0.88
Cux1P53564 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Cux1P53564 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cux1P53564 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Cux1P53564 Mir449c-201ENSMUST00000102192 109 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Gm15073-201ENSMUST00000117432 634 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Gm14335-201ENSMUST00000119165 810 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm23149-201ENSMUST00000158837 230 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm5318-201ENSMUST00000205249 406 ntBASIC9.57□□□□□ -0.88
Cux1P53564 AC153800.1-201ENSMUST00000219212 365 ntBASIC9.57□□□□□ -0.88
Cux1P53564 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC9.57□□□□□ -0.88
Cux1P53564 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC9.57□□□□□ -0.88
Cux1P53564 Mir7-2-201ENSMUST00000083675 97 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cux1P53564 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC9.57□□□□□ -0.88
Cux1P53564 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Gm43258-201ENSMUST00000200312 1950 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Gm37092-201ENSMUST00000193381 1518 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC9.57□□□□□ -0.88
Cux1P53564 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.57□□□□□ -0.88
Cux1P53564 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC9.57□□□□□ -0.88
Cux1P53564 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cux1P53564 Gm28874-201ENSMUST00000190917 3134 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Gm23485-201ENSMUST00000104181 155 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm3943-201ENSMUST00000118606 718 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm14115-201ENSMUST00000119242 482 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm5387-201ENSMUST00000119776 857 ntBASIC9.56□□□□□ -0.88
Cux1P53564 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm44432-201ENSMUST00000203342 938 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm6290-201ENSMUST00000207666 1158 ntBASIC9.56□□□□□ -0.88
Cux1P53564 AC123832.2-201ENSMUST00000215151 129 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm23737-201ENSMUST00000082547 159 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cux1P53564 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cux1P53564 Gm38156-201ENSMUST00000194601 2260 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cux1P53564 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 AC139941.2-201ENSMUST00000221565 1824 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms