Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm24888-201ENSMUST00000104387 130 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm14158-201ENSMUST00000118409 308 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm13207-201ENSMUST00000119862 773 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm12731-201ENSMUST00000120932 268 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm12140-201ENSMUST00000121214 544 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm11341-201ENSMUST00000122316 447 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm11107-201ENSMUST00000165414 505 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Shmt1P50431 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Shmt1P50431 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm26509-201ENSMUST00000180947 948 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm18447-201ENSMUST00000187501 307 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm28060-201ENSMUST00000191554 189 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm37708-201ENSMUST00000192337 895 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm18600-201ENSMUST00000207205 505 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm24695-201ENSMUST00000083877 83 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.94□□□□□ -1.3
Shmt1P50431 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Shmt1P50431 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.94□□□□□ -1.3
Shmt1P50431 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Shmt1P50431 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Shmt1P50431 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Shmt1P50431 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm11271-201ENSMUST00000116054 440 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm14485-201ENSMUST00000119489 493 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm11446-201ENSMUST00000121319 866 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Shmt1P50431 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm3025-201ENSMUST00000163454 489 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm3077-201ENSMUST00000165903 627 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.93□□□□□ -1.3
Shmt1P50431 Gm2878-201ENSMUST00000170173 486 ntBASIC6.93□□□□□ -1.3
Shmt1P50431 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms