Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm11965-201ENSMUST00000122017 277 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm15116-201ENSMUST00000122248 663 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm23385-201ENSMUST00000158592 295 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm24057-201ENSMUST00000158616 302 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm18808-201ENSMUST00000173316 462 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm26915-201ENSMUST00000183080 748 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm28113-201ENSMUST00000188280 229 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm28665-201ENSMUST00000189269 670 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm5511-201ENSMUST00000189380 802 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm29175-201ENSMUST00000189500 402 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm38079-201ENSMUST00000195603 154 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm43590-201ENSMUST00000195987 387 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm2622-201ENSMUST00000200018 471 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm5339-201ENSMUST00000210551 1102 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm8748-201ENSMUST00000211125 587 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 AC115047.1-201ENSMUST00000213795 322 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 AC156795.1-201ENSMUST00000214655 414 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 AC134439.1-201ENSMUST00000220923 600 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm9801-201ENSMUST00000054860 408 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Rfx1P48377 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm42520-201ENSMUST00000199642 1502 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Rfx1P48377 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Rfx1P48377 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm13679-201ENSMUST00000118678 484 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm11617-201ENSMUST00000119609 639 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm15224-201ENSMUST00000120501 388 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm11257-201ENSMUST00000121313 315 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC8.24□□□□□ -1.09
Rfx1P48377 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Rfx1P48377 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm8993-201ENSMUST00000182182 983 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm27401-201ENSMUST00000184052 173 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm19280-201ENSMUST00000190191 205 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC8.24□□□□□ -1.09
Rfx1P48377 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm23604-202ENSMUST00000198428 137 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.24□□□□□ -1.09
Rfx1P48377 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rfx1P48377 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Rfx1P48377 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Rfx1P48377 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms