Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HttP42859 Mir199b-201ENSMUST00000175066 110 ntBASIC6.43□□□□□ -1.38
HttP42859 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.43□□□□□ -1.38
HttP42859 Gm5318-201ENSMUST00000205249 406 ntBASIC6.43□□□□□ -1.38
HttP42859 Gm20786-201ENSMUST00000212649 436 ntBASIC6.43□□□□□ -1.38
HttP42859 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.43□□□□□ -1.38
HttP42859 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.43□□□□□ -1.38
HttP42859 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Peg13-201ENSMUST00000202826 4725 ntBASIC6.43□□□□□ -1.38
HttP42859 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HttP42859 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HttP42859 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.43□□□□□ -1.38
HttP42859 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
HttP42859 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HttP42859 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HttP42859 Gm11759-201ENSMUST00000121742 464 ntBASIC6.43□□□□□ -1.38
HttP42859 Mir6933-201ENSMUST00000184982 81 ntBASIC6.43□□□□□ -1.38
HttP42859 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Gm37421-201ENSMUST00000193088 132 ntBASIC6.43□□□□□ -1.38
HttP42859 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.43□□□□□ -1.38
HttP42859 Gm19936-201ENSMUST00000216414 838 ntBASIC6.43□□□□□ -1.38
HttP42859 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HttP42859 Gm22094-201ENSMUST00000158976 117 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm3242-201ENSMUST00000171273 485 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm6061-201ENSMUST00000175860 492 ntBASIC6.42□□□□□ -1.38
HttP42859 Mir7087-201ENSMUST00000184840 70 ntBASIC6.42□□□□□ -1.38
HttP42859 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.42□□□□□ -1.38
HttP42859 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm5080-201ENSMUST00000220341 743 ntBASIC6.42□□□□□ -1.38
HttP42859 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.42□□□□□ -1.38
HttP42859 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.42□□□□□ -1.38
HttP42859 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HttP42859 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.42□□□□□ -1.38
HttP42859 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.42□□□□□ -1.38
HttP42859 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Gm12308-201ENSMUST00000120440 389 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm11498-201ENSMUST00000120660 949 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm22993-201ENSMUST00000175423 254 ntBASIC6.42□□□□□ -1.38
HttP42859 Gm37103-201ENSMUST00000191830 115 ntBASIC6.42□□□□□ -1.38
HttP42859 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.42□□□□□ -1.38
HttP42859 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HttP42859 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HttP42859 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
HttP42859 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HttP42859 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HttP42859 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HttP42859 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HttP42859 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.41□□□□□ -1.38
HttP42859 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HttP42859 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm9457-201ENSMUST00000180176 372 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm27690-201ENSMUST00000184596 126 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm8523-201ENSMUST00000211386 552 ntBASIC6.41□□□□□ -1.38
HttP42859 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.41□□□□□ -1.38
HttP42859 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm9788-201ENSMUST00000057038 906 ntBASIC6.41□□□□□ -1.38
HttP42859 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms