Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox6P40645 Gm22642-201ENSMUST00000175352 252 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Gm7780-201ENSMUST00000214787 406 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.93□□□□□ -1.46
Sox6P40645 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox6P40645 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.93□□□□□ -1.46
Sox6P40645 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox6P40645 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Sox6P40645 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox6P40645 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm25877-201ENSMUST00000104326 129 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm12189-201ENSMUST00000119779 912 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm14847-201ENSMUST00000121978 519 ntBASIC5.92□□□□□ -1.46
Sox6P40645 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm16297-201ENSMUST00000161466 459 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm20454-201ENSMUST00000172713 221 ntBASIC5.92□□□□□ -1.46
Sox6P40645 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox6P40645 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm8860-201ENSMUST00000193160 445 ntBASIC5.92□□□□□ -1.46
Sox6P40645 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm6070-201ENSMUST00000207275 419 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm18586-201ENSMUST00000217265 518 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm18628-201ENSMUST00000220584 475 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.92□□□□□ -1.46
Sox6P40645 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm6575-201ENSMUST00000222946 697 ntBASIC5.92□□□□□ -1.46
Sox6P40645 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox6P40645 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.92□□□□□ -1.46
Sox6P40645 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox6P40645 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox6P40645 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Sox6P40645 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox6P40645 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox6P40645 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Sox6P40645 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox6P40645 Gm12874-201ENSMUST00000117190 913 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Gm11504-201ENSMUST00000120211 173 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Gm13338-201ENSMUST00000120235 361 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.91□□□□□ -1.46
Sox6P40645 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms