Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
P20040 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
P20040 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.62□□□□□ -1.51
P20040 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.62□□□□□ -1.51
P20040 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
P20040 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.62□□□□□ -1.51
P20040 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
P20040 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Gm26340-201ENSMUST00000102365 99 ntBASIC5.61□□□□□ -1.51
P20040 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
P20040 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
P20040 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
P20040 Gm23979-201ENSMUST00000104071 128 ntBASIC5.61□□□□□ -1.51
P20040 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm12713-201ENSMUST00000118404 764 ntBASIC5.61□□□□□ -1.51
P20040 Gm14870-201ENSMUST00000118414 156 ntBASIC5.61□□□□□ -1.51
P20040 Gm4914-201ENSMUST00000119757 459 ntBASIC5.61□□□□□ -1.51
P20040 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.61□□□□□ -1.51
P20040 Gm13357-201ENSMUST00000120528 537 ntBASIC5.61□□□□□ -1.51
P20040 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.61□□□□□ -1.51
P20040 Gm11925-201ENSMUST00000121375 535 ntBASIC5.61□□□□□ -1.51
P20040 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.61□□□□□ -1.51
P20040 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.61□□□□□ -1.51
P20040 Gm4997-201ENSMUST00000154056 360 ntBASIC5.61□□□□□ -1.51
P20040 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.61□□□□□ -1.51
P20040 Gm25057-201ENSMUST00000157366 88 ntBASIC5.61□□□□□ -1.51
P20040 Gm25244-201ENSMUST00000178089 132 ntBASIC5.61□□□□□ -1.51
P20040 Gm27601-201ENSMUST00000184794 127 ntBASIC5.61□□□□□ -1.51
P20040 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.61□□□□□ -1.51
P20040 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm42708-201ENSMUST00000196332 905 ntBASIC5.61□□□□□ -1.51
P20040 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.61□□□□□ -1.51
P20040 Gm6070-201ENSMUST00000207275 419 ntBASIC5.61□□□□□ -1.51
P20040 Gm32983-201ENSMUST00000208500 505 ntBASIC5.61□□□□□ -1.51
P20040 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
P20040 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm4556-201ENSMUST00000217808 355 ntBASIC5.61□□□□□ -1.51
P20040 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Gm18591-201ENSMUST00000220568 763 ntBASIC5.61□□□□□ -1.51
P20040 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.61□□□□□ -1.51
P20040 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.61□□□□□ -1.51
P20040 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.61□□□□□ -1.51
P20040 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.61□□□□□ -1.51
P20040 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
P20040 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
P20040 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
P20040 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
P20040 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.61□□□□□ -1.51
P20040 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
P20040 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.61□□□□□ -1.51
P20040 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
P20040 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.61□□□□□ -1.51
P20040 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.61□□□□□ -1.51
P20040 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
P20040 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
P20040 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.6□□□□□ -1.51
P20040 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
P20040 Naip3-201ENSMUST00000118082 4208 ntBASIC5.6□□□□□ -1.51
P20040 Pramel-201ENSMUST00000118979 1383 ntBASIC5.6□□□□□ -1.51
P20040 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.6□□□□□ -1.51
P20040 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.6□□□□□ -1.51
P20040 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.6□□□□□ -1.51
P20040 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
P20040 Gm22267-201ENSMUST00000104008 131 ntBASIC5.6□□□□□ -1.51
P20040 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.6□□□□□ -1.51
P20040 Gm11504-201ENSMUST00000120211 173 ntBASIC5.6□□□□□ -1.51
P20040 Gm7494-201ENSMUST00000121248 441 ntBASIC5.6□□□□□ -1.51
P20040 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
P20040 Gm24300-201ENSMUST00000177809 109 ntBASIC5.6□□□□□ -1.51
P20040 Gm24017-201ENSMUST00000178726 109 ntBASIC5.6□□□□□ -1.51
P20040 Gm23952-201ENSMUST00000179380 109 ntBASIC5.6□□□□□ -1.51
P20040 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
P20040 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.6□□□□□ -1.51
P20040 Gm27158-201ENSMUST00000183813 238 ntBASIC5.6□□□□□ -1.51
P20040 Gm8506-201ENSMUST00000186661 829 ntBASIC5.6□□□□□ -1.51
P20040 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms