Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm14382-201ENSMUST00000117374 437 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm12219-201ENSMUST00000119198 443 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm24647-201ENSMUST00000157112 113 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm7244-201ENSMUST00000164658 455 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm3242-201ENSMUST00000171273 485 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm27037-201ENSMUST00000182270 960 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28894-201ENSMUST00000185214 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29048-201ENSMUST00000185342 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29403-201ENSMUST00000185491 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28234-201ENSMUST00000185657 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28248-201ENSMUST00000186093 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29633-202ENSMUST00000186217 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28829-201ENSMUST00000186231 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28261-201ENSMUST00000186417 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28815-201ENSMUST00000186751 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28608-201ENSMUST00000186860 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28122-201ENSMUST00000187088 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28420-201ENSMUST00000187340 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28106-201ENSMUST00000187640 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28698-201ENSMUST00000187734 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28573-201ENSMUST00000187821 380 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29224-201ENSMUST00000187965 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29189-201ENSMUST00000188018 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29476-201ENSMUST00000188397 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29505-201ENSMUST00000188424 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28125-201ENSMUST00000188470 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29391-201ENSMUST00000188545 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29280-201ENSMUST00000188571 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28349-201ENSMUST00000188590 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29652-201ENSMUST00000188622 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28819-206ENSMUST00000188816 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29079-201ENSMUST00000188875 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28213-201ENSMUST00000189183 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29382-201ENSMUST00000189549 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29377-205ENSMUST00000189603 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28327-201ENSMUST00000189638 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28790-201ENSMUST00000189642 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28907-201ENSMUST00000189700 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29586-207ENSMUST00000189745 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29115-201ENSMUST00000189870 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28366-201ENSMUST00000190147 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29212-201ENSMUST00000190384 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29533-201ENSMUST00000190403 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28162-201ENSMUST00000190545 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29030-201ENSMUST00000190848 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28742-201ENSMUST00000191001 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28899-201ENSMUST00000191161 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29567-201ENSMUST00000191188 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28222-201ENSMUST00000191210 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28776-201ENSMUST00000191282 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28400-201ENSMUST00000191332 380 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29306-201ENSMUST00000191366 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29618-201ENSMUST00000191423 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28136-210ENSMUST00000191432 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm29251-201ENSMUST00000191480 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm28658-201ENSMUST00000191532 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm32180-201ENSMUST00000192415 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm30598-201ENSMUST00000192620 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm37369-201ENSMUST00000194179 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm37627-201ENSMUST00000194585 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm34274-201ENSMUST00000195825 615 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm43383-201ENSMUST00000195981 469 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb3O54879 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm7441-201ENSMUST00000220697 1074 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb3O54879 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 AC158531.2-201ENSMUST00000224264 473 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb3O54879 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.05□□□□□ -1.6
Hmgb3O54879 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms