Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm37241-201ENSMUST00000191736 523 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm44253-201ENSMUST00000203387 628 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm45608-201ENSMUST00000210948 389 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC154450.1-201ENSMUST00000220911 485 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC144733.1-201ENSMUST00000222893 1289 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC113125.2-201ENSMUST00000226837 362 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm8526-201ENSMUST00000079153 475 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.36□□□□□ -1.07
NpcdF8VQB8 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Mir697-201ENSMUST00000102316 109 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm12988-201ENSMUST00000119054 478 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm27755-201ENSMUST00000184623 132 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Trbv28-201ENSMUST00000192804 264 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43233-201ENSMUST00000200491 616 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm7492-201ENSMUST00000201745 725 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm5885-202ENSMUST00000203357 528 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm44565-201ENSMUST00000208194 269 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm18268-201ENSMUST00000208445 943 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm45240-201ENSMUST00000211437 674 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NpcdF8VQB8 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC8.35□□□□□ -1.07
NpcdF8VQB8 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NpcdF8VQB8 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.34□□□□□ -1.07
NpcdF8VQB8 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Mir669l-201ENSMUST00000103771 98 ntBASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm11358-201ENSMUST00000122310 373 ntBASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.34□□□□□ -1.07
NpcdF8VQB8 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms