Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm23995-201ENSMUST00000158060 129 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm5990-201ENSMUST00000203126 746 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm45473-201ENSMUST00000211452 616 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a4A2AX52 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a4A2AX52 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm13006-201ENSMUST00000118683 214 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm24731-201ENSMUST00000158227 131 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm3715-201ENSMUST00000172308 617 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm38244-201ENSMUST00000191737 2586 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm19060-201ENSMUST00000201959 421 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm43456-201ENSMUST00000202519 457 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm45690-201ENSMUST00000210775 246 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm18781-201ENSMUST00000211252 924 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC107453.1-201ENSMUST00000227490 3268 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 AC166574.1-201ENSMUST00000226916 1309 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm14512-201ENSMUST00000117924 230 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm12396-201ENSMUST00000121600 306 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm23259-201ENSMUST00000158318 303 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm23343-201ENSMUST00000158964 143 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm25682-201ENSMUST00000083942 164 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm37457-201ENSMUST00000193639 2433 ntBASIC5.31□□□□□ -1.56
Col6a4A2AX52 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col6a4A2AX52 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm15766-201ENSMUST00000118025 813 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm23669-201ENSMUST00000157470 128 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm6472-201ENSMUST00000178147 651 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a4A2AX52 Gm43946-201ENSMUST00000204058 886 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.3□□□□□ -1.56
Col6a4A2AX52 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms