Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm18860-201ENSMUST00000212029 764 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm6581-201ENSMUST00000214545 260 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm5917-201ENSMUST00000217638 721 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.8□□□□□ -1
Ube3bQ9ES34 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ube3bQ9ES34 AC131068.1-201ENSMUST00000226891 482 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm7269-201ENSMUST00000210819 1373 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm43488-201ENSMUST00000198874 2504 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ube3bQ9ES34 Gm15095-201ENSMUST00000118996 1430 ntBASIC8.8□□□□□ -1
Ube3bQ9ES34 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ube3bQ9ES34 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ube3bQ9ES34 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm11488-201ENSMUST00000117277 863 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm14725-201ENSMUST00000120324 828 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.79□□□□□ -1
Ube3bQ9ES34 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm7244-201ENSMUST00000164658 455 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm18848-201ENSMUST00000182069 792 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm26993-201ENSMUST00000182766 789 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm38068-201ENSMUST00000192546 540 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm38279-201ENSMUST00000194067 1131 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm45100-201ENSMUST00000209153 391 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 AC132384.5-201ENSMUST00000218562 226 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.79□□□□□ -1
Ube3bQ9ES34 CT025602.1-201ENSMUST00000227281 382 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 AC154532.2-201ENSMUST00000228947 598 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm25739-201ENSMUST00000082886 107 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 AC134917.1-201ENSMUST00000220517 1449 ntBASIC8.79□□□□□ -1
Ube3bQ9ES34 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ube3bQ9ES34 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ube3bQ9ES34 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms