Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm25344-201ENSMUST00000104503 132 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm14382-201ENSMUST00000117374 437 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm12115-201ENSMUST00000119969 447 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm15842-201ENSMUST00000120513 618 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm3810-201ENSMUST00000122413 476 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm6434-201ENSMUST00000163316 372 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm27186-201ENSMUST00000184223 307 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm27782-201ENSMUST00000185059 199 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm37380-201ENSMUST00000193752 397 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm44227-201ENSMUST00000203576 241 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm44252-201ENSMUST00000204187 330 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm25093-201ENSMUST00000103993 132 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm11434-201ENSMUST00000122379 629 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm22915-201ENSMUST00000157615 136 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm25435-201ENSMUST00000158277 267 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm23762-201ENSMUST00000158348 106 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm23968-201ENSMUST00000175047 125 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Mir5617-201ENSMUST00000176786 57 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm28023-201ENSMUST00000184556 60 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm27825-201ENSMUST00000184586 60 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm37376-201ENSMUST00000192176 453 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm9517-201ENSMUST00000195021 874 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm9504-201ENSMUST00000196322 468 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Gm5324-201ENSMUST00000208115 476 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Lima1Q9ERG0 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms