Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm4660-201ENSMUST00000131499 403 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm23968-201ENSMUST00000175047 125 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm25244-201ENSMUST00000178089 132 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm9167-201ENSMUST00000182469 962 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Mir3473g-201ENSMUST00000183494 136 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm27295-201ENSMUST00000184264 153 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm4556-201ENSMUST00000217808 355 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm46203-201ENSMUST00000218130 478 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Mir3068-201ENSMUST00000083004 136 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm15187-201ENSMUST00000122329 264 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm18006-201ENSMUST00000177411 662 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm28996-201ENSMUST00000190316 721 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm9685-201ENSMUST00000211275 538 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm6575-201ENSMUST00000222946 697 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.18□□□□□ -1.26
Smc1aQ9CU62 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Smc1aQ9CU62 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm24069-201ENSMUST00000104512 127 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm14018-201ENSMUST00000119042 455 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm13462-201ENSMUST00000121472 961 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm12152-201ENSMUST00000122465 684 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm12833-201ENSMUST00000136112 477 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm5125-201ENSMUST00000148614 624 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm26486-201ENSMUST00000158021 110 ntBASIC7.17□□□□□ -1.26
Smc1aQ9CU62 Gm25904-201ENSMUST00000158491 143 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms