Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm12104-201ENSMUST00000120359 979 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm2976-201ENSMUST00000160362 513 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm27185-201ENSMUST00000184296 247 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm28149-201ENSMUST00000187102 378 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm28768-201ENSMUST00000189034 378 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm43383-201ENSMUST00000195981 469 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm32158-201ENSMUST00000200135 404 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm17822-201ENSMUST00000204307 351 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm18559-201ENSMUST00000208249 604 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm9652-201ENSMUST00000209345 163 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm18907-201ENSMUST00000209719 932 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Gm45343-201ENSMUST00000210452 828 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 CT030185.2-201ENSMUST00000222614 1310 ntBASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.66□□□□□ -1.5
Krt88Q9CPR6 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm38200-201ENSMUST00000192083 2111 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm22781-201ENSMUST00000104083 137 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm13679-201ENSMUST00000118678 484 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm11617-201ENSMUST00000119609 639 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm16511-201ENSMUST00000120019 564 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm16113-201ENSMUST00000159629 372 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm18875-201ENSMUST00000188563 882 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm44342-201ENSMUST00000196874 129 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm44383-201ENSMUST00000198940 129 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm43203-201ENSMUST00000200130 558 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm44892-201ENSMUST00000208595 488 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm17994-201ENSMUST00000209260 533 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm8275-201ENSMUST00000219732 424 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC133958.1-201ENSMUST00000227085 961 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Krt88Q9CPR6 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Krt88Q9CPR6 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Krt88Q9CPR6 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Krt88Q9CPR6 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Krt88Q9CPR6 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms