Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm14621-201ENSMUST00000117709 689 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm7206-201ENSMUST00000117730 508 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm11359-201ENSMUST00000120039 567 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm23276-201ENSMUST00000157913 138 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm22668-201ENSMUST00000158716 260 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm28413-201ENSMUST00000189369 291 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm18691-201ENSMUST00000203593 872 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm44673-201ENSMUST00000205692 996 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm18537-201ENSMUST00000205709 989 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 AC118733.1-201ENSMUST00000217387 1217 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim11Q99PQ2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm37925-201ENSMUST00000195352 4255 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Mir290a-201ENSMUST00000104627 83 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm15739-201ENSMUST00000118049 872 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm14466-201ENSMUST00000119028 451 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm11260-201ENSMUST00000121163 942 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm10086-201ENSMUST00000136334 354 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm9671-201ENSMUST00000171502 547 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm24923-201ENSMUST00000178201 88 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Zfp950-206ENSMUST00000178819 171 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm5261-201ENSMUST00000185860 713 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm20832-201ENSMUST00000189076 665 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm20871-201ENSMUST00000191322 931 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm37463-201ENSMUST00000193819 796 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm34015-201ENSMUST00000194908 451 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm30638-201ENSMUST00000195570 656 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm36728-201ENSMUST00000195782 665 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm43580-201ENSMUST00000202892 284 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm8168-201ENSMUST00000209631 948 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm7639-201ENSMUST00000212608 484 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms