Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm20454-201ENSMUST00000172713 221 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm6726-201ENSMUST00000172786 681 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm23633-201ENSMUST00000175293 119 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm42708-201ENSMUST00000196332 905 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm7463-201ENSMUST00000201541 547 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm44232-201ENSMUST00000204537 225 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm32983-201ENSMUST00000208500 505 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm22971-201ENSMUST00000083305 97 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Olfr1160-201ENSMUST00000099839 960 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm25785-201ENSMUST00000104129 125 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm24790-201ENSMUST00000104285 132 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm12439-201ENSMUST00000117162 365 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm15216-201ENSMUST00000118058 277 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm15149-201ENSMUST00000119370 360 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm11498-201ENSMUST00000120660 949 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm24155-201ENSMUST00000175259 110 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm27295-201ENSMUST00000184264 153 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm18849-201ENSMUST00000189861 560 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm8190-201ENSMUST00000199603 586 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm8679-201ENSMUST00000210651 1036 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Gm35619-201ENSMUST00000222548 600 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh4Q99MT2 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.31□□□□□ -1.4
Msh4Q99MT2 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh4Q99MT2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms