Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cdk5rap3Q99LM2 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.58□□□□□ -1.36
Cdk5rap3Q99LM2 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Cdk5rap3Q99LM2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.58□□□□□ -1.36
Cdk5rap3Q99LM2 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Mir688-201ENSMUST00000102055 75 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm15971-201ENSMUST00000119372 211 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm16511-201ENSMUST00000120019 564 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm24359-201ENSMUST00000158418 221 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm27762-201ENSMUST00000183417 109 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm28023-201ENSMUST00000184556 60 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm27825-201ENSMUST00000184586 60 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm9367-201ENSMUST00000205703 546 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm4585-201ENSMUST00000207218 452 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm2754-201ENSMUST00000223383 589 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.57□□□□□ -1.36
Cdk5rap3Q99LM2 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm12115-201ENSMUST00000119969 447 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm14603-201ENSMUST00000121275 448 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm12778-201ENSMUST00000122341 333 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm27468-201ENSMUST00000183577 106 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm27617-201ENSMUST00000184321 168 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm28114-201ENSMUST00000187232 379 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm6436-201ENSMUST00000077163 451 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdk5rap3Q99LM2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms