Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm11342-203ENSMUST00000224879 1324 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Rnu11-201ENSMUST00000104135 134 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm27866-201ENSMUST00000184459 171 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm28023-201ENSMUST00000184556 60 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm27825-201ENSMUST00000184586 60 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm25083-201ENSMUST00000102319 92 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm13455-201ENSMUST00000118767 517 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm13988-201ENSMUST00000119363 288 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm27853-201ENSMUST00000184176 250 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm27156-201ENSMUST00000184589 754 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm4785-201ENSMUST00000191025 751 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm17895-201ENSMUST00000194028 874 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm42804-201ENSMUST00000199701 178 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm21461-201ENSMUST00000200382 863 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm45628-201ENSMUST00000210849 274 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm45725-201ENSMUST00000212962 337 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm6885-201ENSMUST00000217261 372 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.02□□□□□ -1.61
Nup35Q8R4R6 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms