Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm24790-201ENSMUST00000104285 132 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm13455-201ENSMUST00000118767 517 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm23756-201ENSMUST00000157582 114 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Mir425-201ENSMUST00000083645 85 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28aQ8CEI3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm15216-201ENSMUST00000118058 277 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12573-201ENSMUST00000118158 286 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm6987-201ENSMUST00000119319 428 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12174-201ENSMUST00000119853 813 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm14998-201ENSMUST00000120502 495 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm25244-201ENSMUST00000178089 132 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Mir6362-201ENSMUST00000184329 107 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm43576-201ENSMUST00000197937 871 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm8190-201ENSMUST00000199603 586 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm44075-201ENSMUST00000204208 216 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm5928-201ENSMUST00000221839 466 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28aQ8CEI3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm27193-201ENSMUST00000184217 586 ntBASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm29605-201ENSMUST00000190800 292 ntBASIC6.5□□□□□ -1.37
Ccdc28aQ8CEI3 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms