Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28bQ8CEG5 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm14356-201ENSMUST00000118322 869 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm14612-201ENSMUST00000121522 881 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm14353-201ENSMUST00000122200 869 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm16357-201ENSMUST00000144091 474 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm4845-201ENSMUST00000179202 562 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm18709-201ENSMUST00000180564 489 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm37620-201ENSMUST00000192910 501 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm21461-201ENSMUST00000200382 863 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm45319-201ENSMUST00000210220 318 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm3785-201ENSMUST00000221000 202 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm13438-201ENSMUST00000120100 573 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm23756-201ENSMUST00000157582 114 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm25180-201ENSMUST00000157746 115 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm23259-201ENSMUST00000158318 303 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm27019-201ENSMUST00000183056 404 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm42776-201ENSMUST00000198031 406 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm2566-201ENSMUST00000201267 431 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm25852-201ENSMUST00000082790 130 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28bQ8CEG5 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms