Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm22271-201ENSMUST00000104035 128 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm14519-201ENSMUST00000118490 312 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Scarna17-201ENSMUST00000158064 79 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm26271-201ENSMUST00000158349 104 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm23852-201ENSMUST00000158376 77 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm23352-201ENSMUST00000158428 64 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm22949-201ENSMUST00000158562 105 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29412-201ENSMUST00000185869 696 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29335-201ENSMUST00000188361 459 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29634-201ENSMUST00000188467 696 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28699-201ENSMUST00000189193 696 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28837-201ENSMUST00000190397 696 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm17995-201ENSMUST00000209266 530 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 AV026068-218ENSMUST00000223980 575 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 AC117237.1-201ENSMUST00000224035 395 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 AC192333.1-201ENSMUST00000224573 376 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Pcdhb7Q8CDY9 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Mir804-201ENSMUST00000103251 95 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm11207-201ENSMUST00000117824 414 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm11859-201ENSMUST00000118099 455 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm13788-201ENSMUST00000120767 601 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm12499-201ENSMUST00000121961 546 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm13649-201ENSMUST00000122325 606 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm25320-201ENSMUST00000122551 324 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm25667-201ENSMUST00000157701 275 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm16134-201ENSMUST00000161714 336 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm6155-201ENSMUST00000173735 341 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Mir8118-201ENSMUST00000183962 129 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28980-201ENSMUST00000187877 219 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms