Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup98Q6PFD9 Gm14695-201ENSMUST00000121721 282 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm23669-201ENSMUST00000157470 128 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm23995-201ENSMUST00000158060 129 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm25013-201ENSMUST00000158402 128 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Mir3572-201ENSMUST00000175549 86 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm5430-201ENSMUST00000182525 915 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm43744-201ENSMUST00000196387 688 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Nup98Q6PFD9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm15233-201ENSMUST00000118747 400 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm5886-202ENSMUST00000203957 522 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Api5-ps-201ENSMUST00000206607 577 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm6056-201ENSMUST00000221253 488 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm23502-201ENSMUST00000083902 145 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Nup98Q6PFD9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.33□□□□□ -1.24
Nup98Q6PFD9 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm23539-201ENSMUST00000157537 224 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm15970-201ENSMUST00000160623 834 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Mir6362-201ENSMUST00000184329 107 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup98Q6PFD9 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nup98Q6PFD9 Gm20486-201ENSMUST00000101544 128 ntBASIC7.31□□□□□ -1.24
Nup98Q6PFD9 Gm25415-201ENSMUST00000104220 132 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms