Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CiitaP79621 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CiitaP79621 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CiitaP79621 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CiitaP79621 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CiitaP79621 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CiitaP79621 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CiitaP79621 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CiitaP79621 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.96□□□□□ -1.29
CiitaP79621 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CiitaP79621 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.96□□□□□ -1.29
CiitaP79621 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.96□□□□□ -1.3
CiitaP79621 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CiitaP79621 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
CiitaP79621 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm14772-201ENSMUST00000116562 514 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm15901-201ENSMUST00000117663 941 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm4911-201ENSMUST00000119388 945 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm13578-201ENSMUST00000120849 590 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.96□□□□□ -1.3
CiitaP79621 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm23903-201ENSMUST00000157566 131 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm25487-201ENSMUST00000158725 125 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm44370-201ENSMUST00000175436 112 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm28586-201ENSMUST00000189857 456 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm8869-201ENSMUST00000195222 947 ntBASIC6.96□□□□□ -1.3
CiitaP79621 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.96□□□□□ -1.3
CiitaP79621 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CiitaP79621 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.96□□□□□ -1.3
CiitaP79621 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.96□□□□□ -1.3
CiitaP79621 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.96□□□□□ -1.3
CiitaP79621 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CiitaP79621 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CiitaP79621 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CiitaP79621 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.95□□□□□ -1.3
CiitaP79621 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm13400-201ENSMUST00000117436 380 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm14173-201ENSMUST00000117690 278 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm15715-201ENSMUST00000118032 283 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm8855-201ENSMUST00000118888 878 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm12262-201ENSMUST00000119915 305 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Gm23894-201ENSMUST00000158107 313 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm22701-201ENSMUST00000175371 291 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm20620-201ENSMUST00000177528 168 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.95□□□□□ -1.3
CiitaP79621 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Gm37103-201ENSMUST00000191830 115 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm45246-201ENSMUST00000210820 367 ntBASIC6.95□□□□□ -1.3
CiitaP79621 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.95□□□□□ -1.3
CiitaP79621 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.95□□□□□ -1.3
CiitaP79621 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Gm23238-201ENSMUST00000083007 164 ntBASIC6.95□□□□□ -1.3
CiitaP79621 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CiitaP79621 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
CiitaP79621 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms