Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm19073-201ENSMUST00000219978 555 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm10108-201ENSMUST00000078246 319 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm24036-201ENSMUST00000082868 156 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Mir296-201ENSMUST00000083587 79 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.69□□□□□ -1.5
Sec61a1P61620 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sec61a1P61620 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.69□□□□□ -1.5
Sec61a1P61620 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm24473-201ENSMUST00000104483 131 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm13222-201ENSMUST00000119638 138 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm7113-201ENSMUST00000120477 958 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm7350-201ENSMUST00000120964 636 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm15349-201ENSMUST00000121154 204 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm5392-201ENSMUST00000122189 789 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm25722-201ENSMUST00000157498 279 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm26595-201ENSMUST00000181585 484 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm28929-201ENSMUST00000185330 1193 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm7867-201ENSMUST00000189856 546 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.68□□□□□ -1.5
Sec61a1P61620 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm18040-201ENSMUST00000217922 827 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.68□□□□□ -1.5
Sec61a1P61620 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a1P61620 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a1P61620 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a1P61620 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a1P61620 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sec61a1P61620 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm6987-201ENSMUST00000119319 428 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm5166-201ENSMUST00000121332 573 ntBASIC5.67□□□□□ -1.5
Sec61a1P61620 Gm13642-201ENSMUST00000121697 381 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms