Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Cdh11P55288 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm15596-201ENSMUST00000121139 784 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm15171-201ENSMUST00000122191 334 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdh11P55288 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm11545-201ENSMUST00000146507 375 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm22235-201ENSMUST00000157085 110 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm3344-201ENSMUST00000169610 603 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm25574-201ENSMUST00000175245 249 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm27468-201ENSMUST00000183577 106 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm28846-201ENSMUST00000189161 368 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm38291-201ENSMUST00000193671 259 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm5027-201ENSMUST00000206700 375 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm45626-201ENSMUST00000210093 361 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdh11P55288 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm18955-201ENSMUST00000223173 649 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Cdh11P55288 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdh11P55288 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Cdh11P55288 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdh11P55288 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Cdh11P55288 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm13265-201ENSMUST00000118090 421 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm14900-201ENSMUST00000120304 733 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm24781-201ENSMUST00000157636 117 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm23810-201ENSMUST00000175150 74 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm5871-201ENSMUST00000176461 718 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Mir5617-201ENSMUST00000176786 57 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdh11P55288 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm27186-201ENSMUST00000184223 307 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm38068-201ENSMUST00000192546 540 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm37319-201ENSMUST00000193500 636 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm37490-201ENSMUST00000195566 724 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdh11P55288 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5.82□□□□□ -1.48
Cdh11P55288 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdh11P55288 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdh11P55288 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms