Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cux1P53564 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cux1P53564 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cux1P53564 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cux1P53564 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cux1P53564 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.62□□□□□ -0.87
Cux1P53564 Gm36981-201ENSMUST00000192340 4485 ntBASIC9.62□□□□□ -0.87
Cux1P53564 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cux1P53564 Gm14521-201ENSMUST00000119545 350 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm23553-201ENSMUST00000157817 295 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm9671-201ENSMUST00000171502 547 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm16531-201ENSMUST00000180658 967 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC9.61□□□□□ -0.87
Cux1P53564 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC9.61□□□□□ -0.87
Cux1P53564 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 AC154556.1-201ENSMUST00000224587 885 ntBASIC9.61□□□□□ -0.87
Cux1P53564 AC170810.1-201ENSMUST00000228267 672 ntBASIC9.61□□□□□ -0.87
Cux1P53564 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Cux1P53564 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Gm43581-201ENSMUST00000196766 2864 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cux1P53564 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Gm43900-201ENSMUST00000204868 2669 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Cux1P53564 Gm37420-201ENSMUST00000195332 2912 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm13245-201ENSMUST00000119646 260 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm12768-201ENSMUST00000120055 759 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm13531-201ENSMUST00000121893 543 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm6808-201ENSMUST00000162341 807 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Gm8929-201ENSMUST00000197781 1132 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC9.61□□□□□ -0.87
Cux1P53564 AC102287.1-201ENSMUST00000211412 454 ntBASIC9.61□□□□□ -0.87
Cux1P53564 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC9.61□□□□□ -0.87
Cux1P53564 AC108846.4-201ENSMUST00000216783 341 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm6477-201ENSMUST00000217098 764 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm8613-201ENSMUST00000220383 1077 ntBASIC9.61□□□□□ -0.87
Cux1P53564 AC154583.1-201ENSMUST00000224788 655 ntBASIC9.61□□□□□ -0.87
Cux1P53564 CT030645.3-201ENSMUST00000225483 1022 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cux1P53564 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cux1P53564 Gm24525-201ENSMUST00000082917 151 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cux1P53564 Gm37730-201ENSMUST00000192432 2211 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Gm19125-201ENSMUST00000188408 1383 ntBASIC9.61□□□□□ -0.87
Cux1P53564 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Cux1P53564 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cux1P53564 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC9.6□□□□□ -0.87
Cux1P53564 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cux1P53564 AC138765.2-202ENSMUST00000228418 3435 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.6□□□□□ -0.87
Cux1P53564 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cux1P53564 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cux1P53564 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cux1P53564 Gm21399-201ENSMUST00000180210 597 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm8367-201ENSMUST00000186145 887 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm17847-201ENSMUST00000188261 1127 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Igkv4-75-201ENSMUST00000197204 359 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm18689-201ENSMUST00000203969 902 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.6□□□□□ -0.87
Cux1P53564 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cux1P53564 AC172989.1-201ENSMUST00000226387 513 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
Cux1P53564 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cux1P53564 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cux1P53564 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cux1P53564 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cux1P53564 Gm232-201ENSMUST00000216549 2559 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm45528-201ENSMUST00000209854 3145 ntBASIC9.6□□□□□ -0.87
Cux1P53564 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Cux1P53564 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cux1P53564 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Cux1P53564 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.59□□□□□ -0.87
Cux1P53564 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm44102-201ENSMUST00000204031 1666 ntBASIC9.59□□□□□ -0.87
Cux1P53564 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cux1P53564 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Cux1P53564 Gm25345-201ENSMUST00000104505 133 ntBASIC9.59□□□□□ -0.87
Cux1P53564 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cux1P53564 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC9.59□□□□□ -0.87
Cux1P53564 Mir1970-201ENSMUST00000157839 104 ntBASIC9.59□□□□□ -0.87
Cux1P53564 Gm19231-201ENSMUST00000193212 830 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms