Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm22714-201ENSMUST00000116894 78 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm13641-201ENSMUST00000117993 473 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm26023-201ENSMUST00000122722 313 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm18199-201ENSMUST00000173820 835 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm23164-201ENSMUST00000175084 111 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm27219-201ENSMUST00000184633 742 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm21524-201ENSMUST00000190499 696 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm21715-201ENSMUST00000191056 694 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm37770-201ENSMUST00000192855 772 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm7626-201ENSMUST00000195801 353 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm18409-202ENSMUST00000220105 529 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Cdx2P43241 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Cdx2P43241 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm15078-201ENSMUST00000118371 782 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm14300-201ENSMUST00000120800 946 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm11852-201ENSMUST00000120806 222 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm15501-202ENSMUST00000140687 625 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm21756-201ENSMUST00000178380 930 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm21405-201ENSMUST00000179024 930 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm3650-201ENSMUST00000180600 747 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm21191-201ENSMUST00000186484 930 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm29503-201ENSMUST00000191044 930 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm37376-201ENSMUST00000192176 453 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm37784-201ENSMUST00000193233 189 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm6631-201ENSMUST00000193699 559 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm45750-201ENSMUST00000211966 354 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm5374-202ENSMUST00000222910 314 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm22053-201ENSMUST00000083394 200 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx2P43241 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.1□□□□□ -1.43
Cdx2P43241 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.1□□□□□ -1.43
Cdx2P43241 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx2P43241 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx2P43241 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx2P43241 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx2P43241 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms