Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.49□□□□□ -1.21
Traf1P39428 Gm26211-201ENSMUST00000158578 129 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Gm26557-201ENSMUST00000180756 493 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Mir7082-201ENSMUST00000183526 92 ntBASIC7.49□□□□□ -1.21
Traf1P39428 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Gm2602-201ENSMUST00000202112 571 ntBASIC7.49□□□□□ -1.21
Traf1P39428 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Traf1P39428 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Traf1P39428 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.48□□□□□ -1.21
Traf1P39428 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.48□□□□□ -1.21
Traf1P39428 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Traf1P39428 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm13772-201ENSMUST00000118431 317 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm14580-201ENSMUST00000119122 718 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm12307-201ENSMUST00000120581 590 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.48□□□□□ -1.21
Traf1P39428 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm23632-201ENSMUST00000175289 125 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm8183-201ENSMUST00000183134 980 ntBASIC7.48□□□□□ -1.21
Traf1P39428 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
Traf1P39428 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm37809-201ENSMUST00000195050 931 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm45448-201ENSMUST00000211739 209 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm18103-201ENSMUST00000216621 779 ntBASIC7.48□□□□□ -1.21
Traf1P39428 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.48□□□□□ -1.21
Traf1P39428 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Traf1P39428 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Traf1P39428 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.48□□□□□ -1.21
Traf1P39428 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Traf1P39428 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.48□□□□□ -1.21
Traf1P39428 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Cmah-208ENSMUST00000224819 9482 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.47□□□□□ -1.21
Traf1P39428 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.47□□□□□ -1.21
Traf1P39428 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.47□□□□□ -1.21
Traf1P39428 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm12833-201ENSMUST00000136112 477 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 Gm23343-201ENSMUST00000158964 143 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm17046-201ENSMUST00000168078 850 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms