Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nedd8P29595 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Gm14645-201ENSMUST00000118597 417 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Gm13900-201ENSMUST00000119402 498 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.58□□□□□ -1.52
Nedd8P29595 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm28341-201ENSMUST00000190883 472 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm9357-201ENSMUST00000207138 805 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Gm2975-201ENSMUST00000209710 820 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nedd8P29595 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm23686-201ENSMUST00000083241 164 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nedd8P29595 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Nedd8P29595 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm23484-201ENSMUST00000104178 131 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Nedd8P29595 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm16007-201ENSMUST00000117837 286 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm15801-201ENSMUST00000120920 522 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm11258-201ENSMUST00000121086 1218 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm5270-201ENSMUST00000121506 1002 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm13221-201ENSMUST00000121712 430 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm11838-201ENSMUST00000121999 231 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm26037-201ENSMUST00000158150 311 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm8783-201ENSMUST00000159764 522 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm7393-201ENSMUST00000172650 739 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm4322-201ENSMUST00000191094 336 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm42776-201ENSMUST00000198031 406 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm29736-201ENSMUST00000198189 385 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm42472-201ENSMUST00000201626 859 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm18255-201ENSMUST00000211316 765 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC5.57□□□□□ -1.52
Nedd8P29595 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nedd8P29595 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 AC154515.3-201ENSMUST00000225081 1159 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm5582-201ENSMUST00000075251 522 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm24621-201ENSMUST00000082679 140 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.57□□□□□ -1.52
Nedd8P29595 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nedd8P29595 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Nedd8P29595 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nedd8P29595 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nedd8P29595 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nedd8P29595 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nedd8P29595 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms