Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Gm24781-201ENSMUST00000157636 117 ntBASIC5.63□□□□□ -1.51
P20040 Gm22311-201ENSMUST00000158006 110 ntBASIC5.63□□□□□ -1.51
P20040 Gm8550-201ENSMUST00000161621 653 ntBASIC5.63□□□□□ -1.51
P20040 Gm3140-201ENSMUST00000163523 481 ntBASIC5.63□□□□□ -1.51
P20040 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
P20040 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.63□□□□□ -1.51
P20040 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm5871-201ENSMUST00000176461 718 ntBASIC5.63□□□□□ -1.51
P20040 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.63□□□□□ -1.51
P20040 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
P20040 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.63□□□□□ -1.51
P20040 Gm28023-201ENSMUST00000184556 60 ntBASIC5.63□□□□□ -1.51
P20040 Gm27825-201ENSMUST00000184586 60 ntBASIC5.63□□□□□ -1.51
P20040 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.63□□□□□ -1.51
P20040 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.63□□□□□ -1.51
P20040 Gm8860-201ENSMUST00000193160 445 ntBASIC5.63□□□□□ -1.51
P20040 Gm8920-201ENSMUST00000196153 924 ntBASIC5.63□□□□□ -1.51
P20040 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.63□□□□□ -1.51
P20040 Gm17997-201ENSMUST00000211801 840 ntBASIC5.63□□□□□ -1.51
P20040 Gm18586-201ENSMUST00000217265 518 ntBASIC5.63□□□□□ -1.51
P20040 Gm5928-201ENSMUST00000221839 466 ntBASIC5.63□□□□□ -1.51
P20040 Gm9293-201ENSMUST00000223096 306 ntBASIC5.63□□□□□ -1.51
P20040 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.63□□□□□ -1.51
P20040 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
P20040 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
P20040 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.63□□□□□ -1.51
P20040 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.63□□□□□ -1.51
P20040 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.63□□□□□ -1.51
P20040 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
P20040 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
P20040 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.62□□□□□ -1.51
P20040 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
P20040 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.62□□□□□ -1.51
P20040 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.62□□□□□ -1.51
P20040 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.62□□□□□ -1.51
P20040 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
P20040 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
P20040 Gm24790-201ENSMUST00000104285 132 ntBASIC5.62□□□□□ -1.51
P20040 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
P20040 Gm14116-201ENSMUST00000117733 805 ntBASIC5.62□□□□□ -1.51
P20040 Gm14900-201ENSMUST00000120304 733 ntBASIC5.62□□□□□ -1.51
P20040 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.62□□□□□ -1.51
P20040 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.62□□□□□ -1.51
P20040 Gm26381-201ENSMUST00000174895 92 ntBASIC5.62□□□□□ -1.51
P20040 Gm20691-201ENSMUST00000176889 333 ntBASIC5.62□□□□□ -1.51
P20040 Gm27804-201ENSMUST00000185135 119 ntBASIC5.62□□□□□ -1.51
P20040 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.62□□□□□ -1.51
P20040 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Gm2229-201ENSMUST00000193328 710 ntBASIC5.62□□□□□ -1.51
P20040 Gm43383-201ENSMUST00000195981 469 ntBASIC5.62□□□□□ -1.51
P20040 Gm8190-201ENSMUST00000199603 586 ntBASIC5.62□□□□□ -1.51
P20040 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.62□□□□□ -1.51
P20040 Gm43867-201ENSMUST00000203860 525 ntBASIC5.62□□□□□ -1.51
P20040 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5.62□□□□□ -1.51
P20040 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.62□□□□□ -1.51
P20040 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.62□□□□□ -1.51
P20040 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.62□□□□□ -1.51
P20040 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.62□□□□□ -1.51
P20040 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.62□□□□□ -1.51
P20040 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
P20040 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.62□□□□□ -1.51
P20040 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
P20040 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
P20040 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
P20040 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms